IntOGen-mutations: the analysis of cancer genomes published in Nature Methods
Yesterday night, our IntOGen-mutations paper went online in Nature Methods. A couple of years of hard work of our team lies now condensed into a couple of [...]
OncodriveCLUST: a method to reveal cancer drivers based on mutation clustering
We have recently developed a novel method, named OncodriveCLUST, aimed to analyse the mutations observed in sets of tumor samples and identify genes involved in the disease. [...]
How to identify functional genetic variants in cancer genomes?
The possibility to rapidly and inexpensively sequence tumor genomes is opening important new avenues for cancer research. One of the main objectives when sequencing tumor genomes is [...]
Barcelona Summer School of Genomics and Bioinformatics 2013
This year the Barcelona Summer School of Genomics and Bioinformatics is offering two courses, one on "Next Generation Sequencing for Medical Genomics", coordinated by Ferran Casals from [...]
The Biology of Genomes meeting at CSHL: my poster about IntOGen
This is a very short post to share the poster that I am presenting this week at the Biology of Genomes meeting in CSHL. [...]
SVGMap 1.5.0 released
After some kind feedback from the Bergman Lab, we have released a new version of SVGmap, 1.5.0. In the Bergman Lab they are using SVGmap for displaying [...]
New OncodriveFM release 0.3.2
Some time ago Abel wrote about how to identify cancer drivers from tumor somatic mutations, and presented OncodriveFM. Nuria also posted a nice poster explaining it together [...]
Oncogenomics workshop: my slides on the analysis of Somatic Mutations in IntOGen
Last week I attended the Oncogenomics Workshop in Hinxton. This was a really interesting Workshop organized by the Industry program of the EBI. It addressed the issues [...]
New IntOGen Somatic Mutations Analysis version available
We are proud to announce the brand new version of the IntOGen Somatic Mutations Analysis (IntOGen SM) pipeline. We call it version 2.0.0 as it has been completely [...]
Gitools in GenomeSpace and a new user mail list
As some already may know, Gitools has been integrated with GenomeSpace. Together with the GenomeSpace team we have set up a tutorial that demonstrates the power behind [...]
