Tools

Intogen

A framework that uses somatic mutations to identify cancer driver genes and their cancer mutational patterns

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Cancer Genome Interpreter

Platform to facilitate the interpretation of alterations in a patient’s tumor.

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BoostDM

A method to score all possible point mutations (single base substitutions) in cancer genes for their potential to be involved in tumorigenesis

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OncodriveFML

A method to analyze the pattern of somatic mutations across tumors in both coding and non-coding genomic regions to identify signals of positive selection

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OncodriveCLUSTL

A new method to identify clustering of somatic mutations in both coding and non-coding genomic regions to detect signals of positive selection.

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Gitools

Framework for the interactive visualization of genomic data heatmaps.

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OncoPaD

web-tool for the rational design of cancer NGS panels based on mutational data

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Condel

A method to integrate the output of various methods to identify deleterious non-synonymous variants

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Paper

jHeatmap

Javascript library to create interactive heatmaps within webpages

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Paper

OncodriveROLE

A method to classify cancer driver genes into to Activating or Loss of Function roles.

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